Agustin Barria
@Agustinopulus
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Senior Geneticist at Benchmark https://t.co/o8P38Jrplx. Animal breeder of aquaculture species π¦ π¦ͺπ Alter ego of @Aguscoinnopulus
Norway
Joined August 2017
Check out our new manuscript published on @HeredityJournal , "A major quantitative trait locus affecting resistance to Tilapia Lake Virus in farmed Nile tilapia (Oreochromis niloticus)". A collaboration between @roslininstitute and @WorldFish
Check out our article @HeredityJournal on a major QTL affecting resistance to tilapia lake virus in farmed Nile tilapia. Led by @Agustinopulus, and a result of a great @roslininstitute @WorldFishCenter @FISH_CGIAR collaboration #aquaculture #FishSci
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Come and join us at Benchmark genetics! We are looking for a senior geneticist. Great opportunities and challenges working with several aquaculture species worldwide. Even better? You can choose to work from Scotland, Norway or Chile. https://t.co/L22CINLQhr
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1/7ππ¦ͺ New preprint alert! π¦ͺπ Weβve developed a quick, reliable method to detect Bonamia in native oysters β no dissection required! Dive into the details here β‘οΈ https://t.co/0PwVaenuw4
@beatnim @j_nschulze @roslininstitute
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Benchmark Genetics offer high density SNP array genotyping for Atlantic salmon, rainbow trout, whiteleg shrimp, and Nile tilapia @$16 USD per sample, tissue to genotype. Many other panels and services too. See link or visit us at AquaSur to find out more:
bmkgenetics.com
With the launch of our new suite of genotyping tools and services at AquaSur, Benchmark Genetics highlights our commitment to supporting global aquaculture and making advanced technologies more...
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We are looking for a Senior Geneticist to join our great team focussed on genetic improvement of Atlantic salmon, details below: https://t.co/5V6TXuS84o
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Our new paper on the genetic characterisation of farmed and wild Uganda Nile tilapia populations @NAGRC_DB @roslininstitute @IUK_KTN @Diego___RS @RossHouston @Salisbury_Fish @FraslinClemence @ogwangj2 @beinepeter @EzraByakora
https://t.co/CZM4ToB8X8
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π¨New Preprint!π¨ Sea lice threaten wild and farmed Atlantic Salmon worldwide! π But Coho Salmon are resistant to this parasite! ππͺ How can this be?π€ We tackled this question with single nuclei RNA sequencing!𧬠A π§΅(1/7) https://t.co/mYBB0AEFrg
biorxiv.org
Background Salmonid species have followed markedly divergent evolutionary trajectories in their interactions with sea lice. While sea lice parasitism poses significant economic, environmental, and...
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If you are a #DataForGood enthusiast check this repository out https://t.co/or8r5CXII6 with a curated list with #AIforGood #DataScienceForGood resources, share it and suggest new entries for the list!
github.com
Curated list of resources about Data for Good, Data Science for Good, Data Science for Social Good, Data Science for Public Good, Data for Humanity. - darenasc/awesome-data-for-good
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π’ New paper alert! Our latest work on using LD-panel and imputation to improve rainbow trout resistance to columnaris disease from @aqua_impact now published and available online π
link.springer.com
Genetics Selection Evolution - Flavobacterium columnare is the pathogen agent of columnaris disease, a major emerging disease that affects rainbow trout aquaculture. Selective breeding using...
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Previously, we have shown that resistance to PMCV in Atlantic salmon has a significant genetic basis π. Now, we are reporting additional genetic links. Read more: https://t.co/qdmRIt0yEv
#SalmonResearch #Genetics @WeAreBenchmark
onlinelibrary.wiley.com
The infectious agent piscine myocarditis virus (PMCV) causes cardiomyopathy syndrome (CMS) and is responsible for substantial mortality and economic losses in the Atlantic salmon (Salmo salar)...
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Job opportunity core scientist @roslininstitute... We are looking for a new post doc to work with us studying shellfish aquaculture, disease and biology. Lots of exciting projects underway at the moment. Please get in touch for more info... https://t.co/t4wjANoCSK
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Decoding sex determination in salmonids π§¬π: Our latest study confirmed the presence of an autosomal, non-functional sdY gene in Atlantic salmon. Mapped to chromosomes 3 & 6, it sheds light on gender discordances. Read more: [ https://t.co/msAm1EghtF]
#Genomics #Aquaculture
link.springer.com
Marine Biotechnology - The determination of sex in salmonid fishes is controlled by genetic mechanisms, with males being the heterogametic sex. The master sex-determining gene, the sexually...
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Not all #aquaculture systems are equal in their contribution to #SDGs - insightful new paper on diversity, trade-offs and #governance challenges for aquaculture to improve human and planetary health. With a fantastic team of co-authors! #JWAS #foodsystems
https://t.co/9dyQXS8uiE
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Our new paper is finally out! Check out how well-selected low density SNP panels can achieve near maximal genomic prediction accuracy in the fish species that we tested. The addition of imputation can improve accuracy independently of the LD panel design.
frontiersin.org
Genomic selection can accelerate genetic progress in aquaculture breeding programmes, particularly for traits measured on siblings of selection candidates. H...
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Dream job alert!! - and the one that got me started with β¦@WorldFishCenterβ© 7 years ago... Work in beautiful Timor-Leste, with some of the highest marine biodiversity in the world. #marine #biodiversity #fisheries #ecology
apply.workable.com
βWorldFish is a leading international research organization working to transform aquatic food systems to reduce hunger, malnutrition, and poverty. It collaborates with international, regional, and...
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Whole-genome long-read sequencing downsampling and its effect on variant calling precision and recall. #WGS #LongReads #LRS #VariantCalling #Sequencing #Coverage #Benchmarking @biorxivpreprint
biorxiv.org
Advances in long-read sequencing (LRS) technology continue to make whole-genome sequencing more complete, affordable, and accurate. LRS provides significant advantages over short-read sequencing...
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New paper! We investigated the dynamics of ISAV infection in Atlantic salmon cells using single-cell RNAseq, finding evidence of paracrine signalling and more. Thanks to all co-authors!! @OGervais_ @gratacapr @Athi_pap @RossHouston @BioMedCentral
https://t.co/mDp0T6TTNR
link.springer.com
BMC Genomics - Infectious Salmon Anaemia Virus (ISAV) is an Orthomixovirus that represents a large problem for salmonid aquaculture worldwide. Current prevention and treatment methods are only...
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Iβm looking for a core scientist to join me on the Roslin istitute. The overall objective of the lab is to enhance the current livestock breeding strategies by increasing their productivity, adaptability, and resilience through developing novel crossbreeding methods and tools.
Vacancy: @IvanPocrnic @roslininstitute is seeking a Core Scientist in Quantitative Genetics and Breeding to work on developing innovative crossbreeding methods that can be rapidly implemented to address climate change challenges. Deadline May 9. https://t.co/FYI9jcgou4
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